https://byzhang.com/study/ Recent content in Study on Bymunije Hugo -- gohugo.io zh-cn Fri, 07 Feb 2020 00:00:00 +0000 https://byzhang.com/study/mendeley%E5%BC%95%E7%94%A8%E5%8F%82%E8%80%83%E6%96%87%E7%8C%AE/ Fri, 07 Feb 2020 00:00:00 +0000 https://byzhang.com/study/mendeley%E5%BC%95%E7%94%A8%E5%8F%82%E8%80%83%E6%96%87%E7%8C%AE/ 1. 安装Mendeley并登陆 登陆 Mendeley网址下载安装客户端，然后注册并登陆账号，可支持同步备份 2. 安装 Word 插件 在 Mendeley 的Tools中选择In https://byzhang.com/study/software-setting/ Tue, 22 Oct 2019 00:00:00 +0000 https://byzhang.com/study/software-setting/ Sublime Text3 1. Tab自动转换为空格 打开Preferences -> Settings - User 添加代码如下： "tab_size": 4, "translate_tabs_to_spaces": true 2. 个性化设置 { "color_scheme": "Packages/Predawn/predawn.tmTheme", "font_face": "Microsoft Yahei Mono", "font_size": 11, "highlight_line": true, "highlight_modified_tabs": true, "ignored_packages": [ ], "line_padding_top": 3, "show_encoding": true, "show_line_endings": true, "theme": https://byzhang.com/study/markdown%E8%AF%AD%E6%B3%95/ Wed, 04 Sep 2019 00:00:00 +0000 https://byzhang.com/study/markdown%E8%AF%AD%E6%B3%95/ 一、标题 在文字前加#即可成为标题,#后需加空格 1. # 一级标题 2. ## 二级标题 3. ### 三级标题 4. #### 四级标题 5. ##### 五级标题 5. ###### 六级标题 得到的效果如下： 一级标 https://byzhang.com/study/r-tips/ Tue, 13 Aug 2019 00:00:00 +0000 https://byzhang.com/study/r-tips/ 1.数据框 1).写文件[writr.table] write.table(x, file = "", append = FALSE, quote = TRUE, sep = " ",eol = "\n", na = "NA", dec = ".", row.names = TRUE,col.names = TRUE, qmethod = c("escape", "double")) 函数Write.table() https://byzhang.com/study/ubuntu%E5%AE%89%E8%A3%85rstudio-server/ Thu, 18 Jul 2019 00:00:00 +0000 https://byzhang.com/study/ubuntu%E5%AE%89%E8%A3%85rstudio-server/ 1.安装 1.1) 要求 RStudio Server v1.1的最低版本要求是Ubuntu version 12.04 已经安装R 需要sudo权限 1.2）安装基础依赖 sudo apt-get install gdebi-core sudo apt-get install libapparmor1 1.3.1) 下载目前最新版1. https://byzhang.com/study/readfree%E8%87%AA%E5%8A%A8%E7%AD%BE%E5%88%B0/ Tue, 28 May 2019 00:00:00 +0000 https://byzhang.com/study/readfree%E8%87%AA%E5%8A%A8%E7%AD%BE%E5%88%B0/ Readfree每天签到可获取1~3个积分,每天其实还是挺麻烦的,所以折腾了自动签到 获取cookie 在chrome中登录Readfree后, https://byzhang.com/study/blogdown%E6%9C%AC%E5%9C%B0%E8%BF%81%E7%A7%BB/ Thu, 23 May 2019 00:00:00 +0000 https://byzhang.com/study/blogdown%E6%9C%AC%E5%9C%B0%E8%BF%81%E7%A7%BB/ 当Blogdown+Hugo+GitHub+Netlify构建的blog更换电脑或者服务器时 安装blogdown： install.packages('blogdown') 安装hugo： blogdown::install_hugo() 如果报错 https://byzhang.com/study/github-push/ Fri, 19 Apr 2019 00:00:00 +0000 https://byzhang.com/study/github-push/ 上传本地文件到GitHub 第一步：建立git仓库 1)cd到你的本地项目根目录下(或者cd加空格再把项目的文件夹直接拖进终端里,然后回车) (2 https://byzhang.com/study/shell-tips/ Fri, 19 Apr 2019 00:00:00 +0000 https://byzhang.com/study/shell-tips/ commond scp 1.传输文件[本地] scp user@hostip:server_file local_path #文件 scp -r user@hostip:server_folder local_path #文件夹 awk 1.Summary $0：整行 从1开始计数 只能有一对单引号 语句结束加分号(;) 注意文件保存格式在linu https://byzhang.com/study/python-code/ Fri, 19 Apr 2019 00:00:00 +0000 https://byzhang.com/study/python-code/ Basic code 1.split [‘a;b’] to [‘a’],[‘b’] split_target = open("Processing_target_nan_split.txt",'w') with open('Processing_target_nan_withHeader.txt') as Processing_target: count = 0 for line in Processing_target: count += 1 try: line = line.replace('\n','')#去掉末尾换行符 Target = line.split('\t')[7].split(";")[:]#split Index_drug = line.split("\t")[0] Index_cellLine = line.split("\t")[1] AUC = line.split("\t")[2] cellLine_name= line.split("\t")[5] DrugName https://byzhang.com/study/server-tips/ Fri, 19 Apr 2019 00:00:00 +0000 https://byzhang.com/study/server-tips/ Server 1.Jupyter (1).使用 jupyter notebook --port='20021' --ip='0.0.0.0' 端口范围： SS4:20021-200030 SS1:30021-300030 ip: server IP (2). 设置theme jt -t monokai -f fira -fs 13 -cellw 90% -ofs 11 -dfs 11 -T -N fira: 字体 -T： 标题栏 (3). 更改主题后输出显示不全 打开cu https://byzhang.com/study/%E6%9E%84%E5%BB%BAblog/ Thu, 18 Apr 2019 00:00:00 +0000 https://byzhang.com/study/%E6%9E%84%E5%BB%BAblog/ 构建过程可参考yihui’s book 软件准备 安装R(https://www.r-project.org/) 安装rstudio(http